Scripts of the NMRPipe System
pdb2torsion.tcl: Create DYNAMO Torsion Restraint Table from PDB Phi/Psi Angles.
Flag |
Argument |
Default |
Description |
-ref |
refName |
pdbName |
PDB Input For Sequence. |
-in |
pdbName |
ref.pdb |
PDB Input For Angles. |
-tor |
tName |
NONE |
Existing Torsions to Append. |
-seg |
segName |
None |
Default Output Seg Name. |
-r1 |
r1 |
First |
First Residue Output Range. |
-rN |
rN |
Last |
Last Residue Output Range. |
-a1 |
a1 |
r1 |
First Residue in Input Range. |
-id |
firstID |
1 |
First Restraint INDEX Number. |
-excl |
eList |
None |
List of Residues to Exlude. |
-group |
gID |
1 |
Restraint GROUP Number. |
-dPhi |
dPhi |
1.0 |
Desired +/- for Phi Angle, Degrees. |
-dPsi |
dPsi |
1.0 |
Desired +/- for Psi Angle, Degrees. |
-fc |
fc |
1.0 |
Force Constant. |
-nohdr |
|
|
Suppress Output Table Header. |
|
|