Scripts of the NMRPipe System
ov.tcl: Find Coord and Phi/Psi RMS Between Two or More PDB Structures.

Flag	Argument	Default	Description
`-ref`	`refPDBName`	`ref.pdb`	Reference PDB Name.
`-in`	`inPDBName`	`avg.pdb`	Input PDB Name or List.
`-out`	`ovName`	`overlay.pdb`	Output Name for Overlay.
`-align`	`aName`	`None`	Output Names for Aligned PDBs.
`-tmp`	`tempName`	`tmp.pdb`	Temporary File Name.
`-r1`	`r1`	`First`	First Residue in Reference Range.
`-rN`	`rN`	`Last`	Last Residue in Reference Range.
`-a1`	`a1`	`R1`	First Residue in Input Range.
`-atom`	`aList`	`Auto`	Atom Names for Coord RMS.
`-heavy`			Use Atom Names: C* N* O* P* S*
`-norot`			Optimize Translation Only.
`-verb`			Verbose Mode ON (Default).
`-noverb`			Verbose Mode OFF.
`-hdr`			Print Header for Verbose Mode OFF.
`-ignore`			Ignore Seg/Chain Info (Default).
`-noignore`			Use Seg/Chain Info.

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