Frank Delaglio, Ph.D.

19804 Maycrest Way
Germantown MD 20876 USA

301 806-0867
delaglio@nmrscience.com



Programs of the NMRPipe System
readROI: Read a Region of Interest (ROI) from NMRPipe-Format Data

Flag Argument Default Description
 -in inName None Input Name (Required).
 -roi roiID Current ID Number for ROI.
 -ndim finalDim 2 Dimension Count for ROI.
ROI Limits By Upper and Lower Bounds:
 -x xName x1 xn ROI X-Axis Source and Limits.
 -y yName y1 yn ROI Y-Axis Source and Limits.
 -z zName z1 zn ROI Z-Axis Source and Limits.
 -a aName a1 an ROI A-Axis Source and Limits.
ROI Limits By Center and +/- Width:
 -dx xName x0 xW ROI X-Axis Source, Center, Width.
 -dy yName y0 yW ROI Y-Axis Source, Center, Width.
 -dz zName z0 zW ROI Z-Axis Source, Center, Width.
 -da aName a0 aW ROI A-Axis Source, Center, Width.
Alignment Options:
 -center axisList None Align Center of ROI.
 -left axisList None Align Left Edge of ROI.
 -right axisList None Align Right Edge of ROI.
 -edge axisList None Align Both Edges of ROI.
Real vs Imaginary Data (X-Axis Only):
 -real Use X-Axis Real Data (Default).
 -imag Use X-Axis Imaginary Data.
Arguments for Report Generation:
 -noverb Verbose Mode Off.
 -verb Verbose Mode On.
Arguments to Write a Region of Interest.
 -out outName Output Name for ROI result.
 -roi roiID ID of ROI, Default is Current ROI.
 -tty Suppress Check for I/O to TTY.
 -ov Allow overwrite of existing data.
Strip Append Options (2D ROIs Only):
 -init Initialize (delete) existing file. Use prior to appending strips.
 -append Append to the existing file.
 -offset 0.0 Strip Axis Offset.
 -step 0.0 Strip Axis Step Size. Use 0.0 for no axis adjustment.
Arguments for Report Generation:
 -noverb Verbose Mode Off.
 -verb Verbose Mode On.
Special Stand-Alone Options:
 -silent No Messages from Stand-Alone Command.
 -vec vNameList NMRWish vector functions (vSum vMin vMax ... Also: N NLIST)